Copper can get into the glass pores. It can be pulled out of there by running carbon in the tank for awhile.
Giving an example here of Copper in a QT.
Here are Leebca's notes on the subject of cleaning a QT after using copper
QT/Hospital Tank Clean Up With Copper
About the most frequently used medication that presents a cleaning problem to the aquarist is the use of copper to treat a disease. Copper will attach itself to plastics and glass. Even though the copper is so little that it can't be detected by a regular copper test kit, it is in high enough concentration to kill invertebrates that the aquarist may attempt to quarantine. Thus a quarantine tank turns into a hospital tank for copper treatments. The hospital tank can't be used for a QT for invertebrates, until it has been cleaned enough to remove the copper 'stuck' in the system.
If the copper treatment was successful and the fish is disease-free AND the tank will only be used to quarantine fish, then like the first case, there is no need to do any cleaning. The bio filter should be kept in the hospital tank or replaced, but NOT returned to the display tank.
If the hospital tank needs to be copper-free then there is a complex cleaning process to follow. However after experiments with snails, crabs, and Xenia, the following cleaning is good enough to put the copper in low enough concentration in the water to support these marine lifeforms. The bio filter must be thrown away. Toss away equipment including tubing, and anything that can't handle the cleaning process or is too difficult to make sure is properly cleaned.
1. A few hot tap water rinses (as hot as can be stood by the tank/equipment, and aquarist!)
2. Let tank/equipment cool off
3. Wash with Vinegar; 1:10 dilution of household/salad vinegar
4. Several tap water rinses
5. Wash with a mild liquid soap solution
6. Several tap water rinses
7. Wash with bleach; 1:10 dilution of household bleach
8. Several tap water rinses
9. Several RO/DI or distilled water rinses
10. Let go bone dry for a few days before use
Anyone can Google to find out who Lee Birch is (aka Leebca). But he is renowned fish expert.