6 weeks? Wow, I've never heard of such a long time in copper. Perhaps it has something to do with the chelated version? I use cupramine myself, so I'm not familiar with coppersafe. . Max 30 days according to the folks at Seachem when using cupramine. 14 days for velvet, 30 for ich. I guess we all have different routines.One thing I do, and this is purely personal preference, so follow only if you feel comfortable, when I acquire a new fish my first goal is to get the fish eating and not treating. The fish is already stressed out, it's been through God knows what. That's the reason my QT is painted black on 3 sides. Once I am done acclimating the fish I let the fish settle in within his new environment. After couple of hours I will try to feed either a very small amount of mysis, or even pellets. Once I see the fish has been eating properly for 2-3 days, then I will start my treatment regiment. Now this applies fish that already seem healthy. If I see a fish that looks sick, all bets are off. We go into emergency survival mode. This has worked for me so far. But as I said, please follow only if you feel comfortable and it's case by case basis.
And in your case, I think you will be fine as soon as you do your WC after the copper treatment is over. My clowns used to sulk inside the PVC fitting the entire 6 weeks I did the copper treatment. But they would come out to eat just a little. Copper is toxic, and fishes don't necessarily enjoy that toxic environment. Best of luck to you.
Anyhoo, for the OP, I hope your fish are okay and that they start eating soon. Let us know how they do now that they are off the meds

Cool, same here, they would hide and eat very little, which made me think they were sick but I guess, it's from the meds. I pulled them off the meds, so I'm going to see what happens next
There is room in that process to screw up like a human can...but there are also some established methods for success where the most common "screw ups" are avoided entirely. Success doesn't just come with luck, but luck can be along for the ride!

