So the weather stripping didn't work as seamlessly as I thought. It goes on real well with no issues, but it really doesn't provide a completely air tight seal. I first cut the baffles with no groove to account for the silicone. This obviously did not work. I then tried shaving off the edges to work around the silicone. This too did not provide an air tight seal. The vertical seams are flawless and do not let any water through. It is the bottom corners that are the problem. I pushed the baffle down as hard as I could and it still wouldn't seal completely. Any more pressure and I was afraid of breaking the glass. I also tried double stripping. I attached one strip directly on the tank glass and pushed it flush against the silicone on the bottom seams. Then I installed the baffle (with its own stripping) flush against the stripping on the glass. This too did not work. After having exhausted all ideas and options, I finally gave up accepting the fact that I would see a small amount of water somehow finds its way through.
With that being said, the amount of water than leaks isn't a whole lot. It is a very slow trickle. So in the grand scheme of things, it might not affect the levels all too much. I finished up all the baffles and will probably water test it over the next few days to see how it functions. Will keep you posted.