Well its simple really. The constant mode blows water in a constant flow in one direction which means coral that have extended polyps all blow in the same direction constantly (not natural ocean movement).
The pulsing mode gives you surges of water, so when when the weak push is then followed by a strong push the water moves back and forth in surges. On the weak push your corals have time to sort of float their tentacles back in the other direction before the strong surge pushes them the other way again. The shorter the sec between the pulse mode the more your corals move back and forth, the longer between pulse mode allows the corals to spend 10 secs in one direction and 10 secs in the other direction.
P.S We run A & B paddles on both the gyers. So both push forward.