The capacity of a skimmer to remove TOC ( Total Organic Carbon, including live bacteria, particulate organic compounds and DOC, Disolved Organic Compounds) is not very high,
it has been shown to be max +- 30% and the difference between different types of skimmers in removing TOC is neglectable. If it comes to removing TOC and DOC, the biggest difference will be the price. Also the name" protein skimmer" is discussable as there is a lot of protein that may be present in TOC but there are not many proteins to remove by a skimmer, as Ronald L. Shimek has shown in 2002. (
ref: MB CMF De Haes2018).
One must be aware that activating and stimulating fast exponential heterotrophic growth by adding organic carbon compounds ends up in exponential dead. The part not skimmed or and not consumed will be remineralized which means the bio-waste must first be transformed into DOC to be reused by microorganisms, this needs a lot of energy, dissimilation of previously produced sugars, the production of ammonia, phosphates, and CO2. It has been shown more ammonia and phosphate may be produced as used for cell synthesis and growth.
Adding carbohydrates (
vodka method) is not without risks and may kill corals. (
ref:Makazi Baharini CMF De Haes 2018)
Adding organic carbon does not export nutrients and produces bio-load, which loads the bearing capacity. For example, to reduce the same amount of ammonium +- x 40 bacterial heterotrophic bioload must be produced as would be needed for bacterial autotrophic ammonium reduction. The stimulated high heterotrophic growth does also needs energy, for which it may find its carbon source in the supplemented organic carbon, released as CO2. This means the aquarium may become dependable on these supplements.
Using a good mechanical filter may be more effective in removing bio-wast and limit remineralization, for example in combination with harvesting
biofloc. This way the presence of TOC can be limited without favoring selective growth.
A skimmer is very selective in removing organic compounds which may lead to the selective growth of organisms. Inorganic nutrients, produced by dissimilation and respiration, are left behind which, in a closed system, may lead to an unbalance between inorganic nutrients availability and other essential building materials.
The development of organic molecules absorbing polymers may become the future if it comes to controlling DOC.
A good reason to continue to use a skimmer may be its capacity to remove bio-toxins, but also for this aspect
it is not clear which toxins are removed and which is favored to stay.