OK I have 16 frags coming in the mail tomorrow, mostly zoas. They should arrive by noon. I am going to set up a QT tank ASAP. But, what do I do to my existing tank? I am pretty sure it came from one coral that bleached already. So, form what I'm reading, the infection must have spread through the water column. How long will it be "active" or "alive"? What can be affected? Are my LPS in danger? Any soft corals? Do I have to treat the entire tank now? Does anyone have any recommendations?
I am just so broken-hearted over this.
It isn't an infection or virus, it is a reaction of a sensitive coral to a change in parameters. An alkalinity of 12 is very high, I keep mine at 7.8-8.1, when it gets close to 9 my sps start to look bad. Anything over that and they will start to die. What is your magnesium, zoas are sensitive to magnesium and when your mag gets low (in my experience) coral become extra sensitive to high alk and calcium levels. Lps are sensitive to high alk and will start to slowly recede after a few days but can quickly recover, they usually will not die as fast as sps and the aquarist may not even notice the damage an recovery because it is so slow.
With your new coral, acclimate them very slow and put them on the bottom of your tank (measure the alk, cal, and mag of the shipping water my guess is they will be a lot lower than yours). After acclimated let your alk and calcium slowly come down by not adding anymore to a better level. Shoot for 8.1 alk, 400-430 cal, and 1260-1280 mag. After your parameters have reached that, maintain them there. You may want to bring your salinity up to 1.026 (34ppt) measured with a refractometer. After three days of the coral sitting in the sand AND your lights are at the intensity you always plan to run them you can start moving them around the tank but don't move them higher than about four inches every three days. If you need to, use a frag rack to light acclimate them.
Good luck
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