I very much dislike this term. While I don't know what the official definition is, it is a widely used term in scientific papers. I was shocked by the number of articles that divided bacteria into "harmful" and "non harmful" categories.
What I have figured out is that cyanobacteria can fit into both categories depending on the species. I've tried to find an exact definition with no luck.
I'm going to focus on what I perceive as the two main concerns I see with these comments. The first is why I listed the N: P ratios that I did. I found multiple studies that investigated the C:N: P ratio of different marine organisms. These were fairly consistent in that they did not focus on single strains of any particular bacteria/flagellate/algae but looked at them as naturally occurring groups which are also averaged over time. So, as in the Redfield Ratio, they may not reflect an accurate picture at any single moment. As I believe I commented on earlier, the Redfield Ratio actually varies from 5:1 when dark and up to 35:1 under very bright lighting. Some individual strains of the phytoplankton become more efficient processing during the dark but most become less efficient.
As a side note, we see this changing of consumption in our aquariums being reflected in our NO3/PO4 testing. This is one of the main reasons it is important to test at the same time every day to be able to accurately determine trends.
If you are interested, I can try to dig up some of these articles and repost them. I do wish I had done a better job collecting the documentation I looked at. Note to self: well past time to start creating an offline library for these articles!
The other thing I have seen you express concern with is the basis for my recommendations. I will try to explain them in a broad manner which I believe will put them all into perspective.
Phytoplankton is the main driver of nutrient balance at the lowest level of the food chain and tends to carries its way up throughout. I also went to look at the N: P ratio of manufactured foods when it was available such as pellets and flakes. I found that most strive to keep the N: P ratio between 15:1 and 30:1. I did find one pellet manufacture that advertised a ratio of 5:1. I was disappointed that I couldn't find a ratio for any products advertised as "low phosphate". This research also reinforced that the ratio of food added falls in this range.
http://www.int-res.com/articles/meps/8/m008p015.pdf
My thought process is that if we understand the "average" N: P ratio of what we add we have an average N: P ratio of what is growing then we have a starting ground to make assumptions on possible treatments. With Carbon dosing we expect to be taking out 50:1 on average. Much of this is removed via skimming so is no longer available in the system. If we start with a ratio of 15:1 for nutrients added I feel it is reasonable to expect the balance of nutrients in our system would shift to one of higher phosphorus.