Thank you to all that helped. At this point I am just sitting back observing. I feel for sure that one group is closed up because they were getting stung. I will just leave them be and see what happens. For the other group, I will also let them be. They will either make it or they don't. I'm not going to do anything differently as I don't want to hurt the other corals in my tank.
Joshporksandwhich, thanks for the info and steering me away from the dirty water theory. I appreciate it.
Bradsreeeftank, thanks for the info. I looked again at night and I don't see anything. I don't know. I will look again in a little while to verify it but not thinking nudibranches. All of my other ones look good. Had this happen once before to another colony and they came back fine after a few weeks. We shall see.
Im open to info if anybody else has any. Thanks again.
Rob