Did you ever figure out what may have caused the losses? I just read the last 4 pages, but it seems like nothing specific has been nailed down.
I ran into a guy a few weeks ago that had a bad cyano bloom in his tank, and I gave him a package of RedCyano Rx. Saw him about a week later at MACNA and he was all smiles, cyanobacteria was gone. That's what I expected, too.
How bad was your outbreak? Did you remove any of it prior to dosing? Did you tank's water turn pink? I've heard of that twice in the past decade, and those people lost their reefs. That's why I asked if you removed the bulk of it first.
How much air did you really add? Was it a wooden airstone, or a ceramic one? Even moving a powerhead up to the surface so it is chopping up air and water to just lather the tank might have helped. Would you say it was plenty of air, or just what you had available but could have been better?
Slightly off topic example: Years ago, I overdosed my tank with Vitamin C and it shut down all my LPS corals. I ran up to the LFS and got a 4" ceramic airstone and hung it so it was parked right in front of a Vortech to blast the bubbles everywhere. I removed my skimmer's collection cup and let it bubble over the body. I opened the door from the fishroom to outside to bring in fresh air and pointed a huge floor fan into the room to help add oxygen. This was on my 280g reef. Fortunately, nothing was killed in that mistake. Here's a picture, but not of that event.