What ever has stressed the corals may have taken time to actually show. It could be a combination of changes that together over stressed the coral. Lowering the nutrients to fast, dropping the alk to quickly, changing the lights, temp swings, co2 buildup, calcium or salinity swings. One stressor the coral may handle but bringing the alk down, lowering the nutrients and changing the light are all stressors that can cause necrosis, then because of the corals being stressed it can lower resistance to flat worms or even fish will start picking at unhealthy tissue. You will have to go slow and eliminate each item. There is always a cause but when we make multiple changes around the same time we don't know which caused it or the same can be said which fixed it.