In my experience with the ocean and fishing, during the day its a lot more windy which causes the ocean to have choppy waves. The choppy waves make the water near shore and on the reef pretty rough.
At night time the winds die down and the ocean is more calm with a more gentle up and down movement of the water. The waves aren't breaking as hard over the reef and even the diving is a lot easier since you're not being thrown around and slammed. Not saying there is no current at night, but IME the ocean slightly calmer at night.
*Edit* Unless there's a storm rolling in, then the ocean is rough all day and night.